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Bangert, R. K., E. V. Lonsdorf, G. M. Wimp, S. M. Shuster, D. Fischer, J. A. Schweitzer, G. J. Allan, J. K. Bailey, and T. G. Whitham. 2008. Genetic structure of a foundation species: scaling community phenotypes from the individual to the region.. Heredity 100:121 - 31.

Lojewski, N. R., D. G. Fischer, J. K. Bailey, J. A. Schweitzer, T. G. Whitham, and S. C. Hart. 2012. Genetic components to belowground carbon fluxes in a riparian forest ecosystem: a common garden approach.. The New phytologist 195:631 - 9.

Keith, A. R., J. K. Bailey, and T. G. Whitham. 2010. A genetic basis to community repeatability and stability.. Ecology 91:3398 - 406.

Busby, P. E., G. Newcombe, R. Dirzo, and T. G. Whitham. 2013. Genetic basis of pathogen community structure for foundation tree species in a common garden and in the wild .. Journal of Ecology 101:867 - 877.

Lojewski, N. R., D. G. Fischer, J. K. Bailey, J. A. Schweitzer, T. G. Whitham, and S. C. Hart. 2009. Genetic basis of aboveground productivity in two native Populus species and their hybrids.. Tree physiology 29:1133 - 42.

Compson, Z. G., K. C. Larson, M. S. Zinkgraf, and T. G. Whitham. 2011. A genetic basis for the manipulation of sink-source relationships by the galling aphid Pemphigus batae.. Oecologia 167:711 - 21.

Whitham, T. G., and R. K. Bangert. 2007. Genetic assembly rules and community phenotypes. Evolutionary Ecology 21:549 - 560.

Marks, J. C., G. A. Haden, B. A. Harrop, E. G. Reese, J. L. Keams, M. E. Watwood, and T. G. Whitham. 2009. Genetic and environmental controls of microbial communities on leaf litter in streams .. Freshwater Biology 54:2616 - 2627.

Wymore, A. S., A. T. H. Keeley, K. M. Yturralde, M. L. Schroer, C. R. Propper, and T. G. Whitham. 2011. Genes to ecosystems: exploring the frontiers of ecology with one of the smallest biological units.. The New phytologist 191:19 - 36.

Bangert, R. K., G. J. Allan, R. J. Turek, G. M. Wimp, N. Meneses, G. D. Martinsen, P. Keim, and T. G. Whitham. 2006. From genes to geography: a genetic similarity rule for arthropod community structure at multiple geographic scales.. Molecular ecology 15:4215 - 28.

Schweitzer, J. A., M. D. Madritch, J. K. Bailey, C. J. LeRoy, D. G. Fischer, B. J. Rehill, R. L. Lindroth, A. E. Hagerman, S. C. Wooley, S. C. Hart, and T. G. Whitham. 2008. From genes to ecosystems: the genetic basis of condensed tannins and their role in nutrient regulation in a Populus model system .. Ecosystems 11:1005 - 1020.

Bailey, J. K., J. A. Schweitzer, F. Ubeda, J. Koricheva, C. J. LeRoy, M. D. Madritch, B. J. Rehill, R. K. Bangert, D. G. Fischer, G. J. Allan, and T. G. Whitham. 2009. From genes to ecosystems: a synthesis of the effects of plant genetic factors across levels of organization.. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 364:1607 - 16.

Whitham, T. G., J. K. Bailey, J. A. Schweitzer, S. M. Shuster, R. K. Bangert, C. J. LeRoy, E. V. Lonsdorf, G. J. Allan, S. P. DiFazio, B. M. Potts, D. G. Fischer, C. A. Gehring, R. L. Lindroth, J. C. Marks, S. C. Hart, G. M. Wimp, and S. C. Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems.. Nature reviews. Genetics 7:510 - 23.

Whitham, T. G., S. P. DiFazio, J. A. Schweitzer, S. M. Shuster, G. J. Allan, J. K. Bailey, and S. A. Woolbright. 2008. Extending genomics to natural communities and ecosystems.. Science 320:492 - 5.

Whipple, A. V., and L. M. Holeski. 2016. Epigenetic Inheritance across the Landscape.. Frontiers in genetics 7:189.

Gehring, C. A., R. C. Mueller, and T. G. Whitham. 2006. Environmental and genetic effects on the formation of ectomycorrhizal and arbuscular mycorrhizal associations in cottonwoods.. Oecologia 149:158 - 64.

Dijkstra, P., S. C. Thomas, P. L. Heinrich, G. W. Koch, E. Schwartz, and B. A. Hungate. 2011. Effect of temperature on metabolic activity of intact microbial communities: Evidence for altered metabolic pathway activity but not for increased maintenance respiration and reduced carbon use efficiency. Soil Biology and Biochemistry 43:2023-2031.

Morrissey, E. M., T. A. McHugh, L. Preteska, M. Hayer, P. Dijkstra, B. A. Hungate, and E. Schwartz. 2015. Dynamics of extracellular DNA decomposition and bacterial community composition in soil.. Soil Biology and Biochemistry 86:42 - 49.

Butterfield, B. J., J. Bradford, C. Armas, I. Prieto, and F. I. Pugnaire. 2016. Does the stress gradient hypothesis hold water? An assessment of vegetation effects on soil moisture and implications for plant-plant interactions.. Functional Ecology 30:10 - 19.

Fischer, F. G., S. C. Hart, B. J. Rehill, R. L. Lindroth, P. Keim, and T. Gand Whitham. 2006. Do high-tannin leaves require more roots?. Oecologia 149:668 - 75.

Rehill, B. J., T. G. Whitham, G. D. Martinsen, J. A. Schweitzer, J. K. Bailey, and R. L. Lindroth. 2006. Developmental trajectories in cottonwood phytochemistry.. Journal of chemical ecology 32:2269 - 85.

Woolbright, S. A., S. P. Difazio, T. Yin, G. D. Martinsen, X. Zhang, G. J. Allan, T. G. Whitham, and P. Keim. 2008. A dense linkage map of hybrid cottonwood (Populus fremontii x P. angustifolia) contributes to long-term ecological research and comparison mapping in a model forest tree.. Heredity 100:59 - 70.

Grady, K. C., D. C. Laughlin, S. M. Ferrier, T. E. Kolb, S. C. Hart, G. J. Allan, and T. G. Whitham. 2013. Conservative leaf economic traits correlate with fast growth of genotypes of a foundation riparian species near the thermal maximum extent of its geographic range .. Functional Ecology 27:427 - 438.

Bridgeland, W. T., P. Beier, T. Kolb, and T. G. Whitham. 2010. A conditional trophic cascade: birds benefit faster growing trees with strong links between predators and plants.. Ecology 91:73 - 84.

Whitham, T. G., C. A. Gehring, L. J. Lamit, T. Wojtowicz, L. M. Evans, A. R. Keith, and D. Solance Smith. 2012. Community specificity: life and afterlife effects of genes.. Trends in plant science 17:271 - 81.

Shuster, S. M., E. V. Lonsdorf, G. M. Wimp, J. K. Bailey, and T. G. Whitham. 2006. Community heritability measures the evolutionary consequences of indirect genetic effects on community structure.. Evolution; international journal of organic evolution 60:991 - 1003.

Patterson, A. M., L. Flores-Rentería, A. V. Whipple, T. G. Whitham, and C. A. Gehring. 2018. Common garden experiments disentangle plant genetic and environmental contributions to ectomycorrhizal fungal community structure.. New Phytologist 221.

Hultine, K. R., K. C. Grady, T. E. Wood, S. M. Shuster, J. C. Stella, and T. G. Whitham. 2016. Climate change perils for dioecious plant species.. Nature Plant 16109 109.

Gehring, C. A., M. Hayer, L. Flores-Renteria, A. L. Krohn, E. Schwartz, and P. Dijkstra. 2016. Cheatgrass invasion alters the abundance and composition of dark septate fungal communities in sagebrush steppe.. Botany 9:481 - 491.

Butterfield, B. J., A. L. Camhi, R. L. Rubin, and C. R. Schwalm. 2016. Chapter Five – Tradeoffs and Compatibilities Among Ecosystem Services : Biological, Physical and Economic Drivers of Multifunctionality. Advances in Ecological Research 54:207 - 243.

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