Zinkgraf, M. S., N.  Meneses, T. G.  Whitham, and G. J.  Allan. 2016. Genetic variation in NIN1 and C/VIF1 genes is significantly associated with Populus angustifolia resistance to a galling herbivore, Pemphigus betae.. Journal of insect physiology 84:50 - 59.

Lau, M. K., A. R.  Keith, S. R.  Borrett, S. M.  Shuster, and T. G.  Whitham. 2016. Genotypic variation in foundation species generates network structure that may drive community dynamics and evolution.. Ecology 97:733 - 42.

Floate, K. D., J.  Godbout, M. K.  Lau, N.  Isabel, and T. G.  Whitham. 2016. Plant-herbivore interactions in a trispecific hybrid swarm of Populus: assessing support for hypotheses of hybrid bridges, evolutionary novelty and genetic similarity.. The New phytologist 209:832 - 44.

Compson, Z. G., K. J.  Adams, J. A.  Edwards, J. M.  Maestas, T. G.  Whitham, and J. C.  Marks. 2013. Leaf litter quality affects aquatic insect emergence: contrasting patterns from two foundation trees.. Oecologia 173:507 - 19.

Whitham, T. G., C. A.  Gehring, L. J.  Lamit, T.  Wojtowicz, L. M.  Evans, A. R.  Keith, and D. Solance Smith. 2012. Community specificity: life and afterlife effects of genes.. Trends in plant science 17:271 - 81.

Holeski, L. M., M. L.  Hillstrom, T. G.  Whitham, and R. L.  Lindroth. 2012. Relative importance of genetic, ontogenetic, induction, and seasonal variation in producing a multivariate defense phenotype in a foundation tree species.. Oecologia 170:695 - 707.

Evans, L. M., J. S.  Clark, A. V.  Whipple, and T. G.  Whitham. 2012. The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance.. Oecologia 168:483 - 9.

Wymore, A. S., A. T. H.  Keeley, K. M.  Yturralde, M. L.  Schroer, C. R.  Propper, and T. G.  Whitham. 2011. Genes to ecosystems: exploring the frontiers of ecology with one of the smallest biological units.. The New phytologist 191:19 - 36.

Compson, Z. G., K. C.  Larson, M. S.  Zinkgraf, and T. G.  Whitham. 2011. A genetic basis for the manipulation of sink-source relationships by the galling aphid Pemphigus batae.. Oecologia 167:711 - 21.

Smith, D. S., J. K.  Bailey, S. M.  Shuster, and T. G.  Whitham. 2011. A geographic mosaic of trophic interactions and selection: trees, aphids and birds. Journal of Evolutionary Biology 24:422 - 429.

Bridgeland, W. T., P.  Beier, T.  Kolb, and T. G.  Whitham. 2010. A conditional trophic cascade: birds benefit faster growing trees with strong links between predators and plants.. Ecology 91:73 - 84.

Keith, A. R., J. K.  Bailey, and T. G.  Whitham. 2010. A genetic basis to community repeatability and stability.. Ecology 91:3398 - 406.

Bailey, J. K., J. A.  Schweitzer, F.  Ubeda, J.  Koricheva, C. J.  LeRoy, M. D.  Madritch, B. J.  Rehill, R. K.  Bangert, D. G.  Fischer, G. J.  Allan, and T. G.  Whitham. 2009. From genes to ecosystems: a synthesis of the effects of plant genetic factors across levels of organization.. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 364:1607 - 16.

Sthultz, C. M., T. G.  Whitham, K.  Kennedy, R.  Deckert, and C. A.  Gehring. 2009. Genetically based susceptibility to herbivory influences the ectomycorrhizal fungal communities of a foundation tree species.. The New phytologist 184:657 - 67.

Barbour, R. C., J. M.  O'Reilly-Wapstra, D. W.  De Little, G. J.  Jordan, D. A.  Steane, J. R.  Humphreys, J. K.  Bailey, T. G.  Whitham, and B. M.  Potts. 2009. A geographic mosaic of genetic variation within a foundation tree species and its community-level consequences.. Ecology 90:1762 - 72.

Holeski, L. M., M. J. C.  Kearsley, and T. G.  Whitham. 2009. Separating ontogenetic and environmental determination of resistance to herbivory in cottonwood.. Ecology 90:2969 - 73.

Whitham, T. G., S. P.  DiFazio, J. A.  Schweitzer, S. M.  Shuster, G. J.  Allan, J. K.  Bailey, and S. A.  Woolbright. 2008. Extending genomics to natural communities and ecosystems.. Science 320:492 - 5.

Bangert, R. K., E. V.  Lonsdorf, G. M.  Wimp, S. M.  Shuster, D.  Fischer, J. A.  Schweitzer, G. J.  Allan, J. K.  Bailey, and T. G.  Whitham. 2008. Genetic structure of a foundation species: scaling community phenotypes from the individual to the region.. Heredity 100:121 - 31.

Evans, L. M., G. J.  Allan, S. M.  Shuster, S. A.  Woolbright, and T. G.  Whitham. 2008. Tree hybridization and genotypic variation drive cryptic speciation of a specialist mite herbivore.. Evolution; international journal of organic evolution 62:3027 - 40.

Wimp, G. M., S.  Wooley, R. K.  Bangert, W. P.  Young, G. D.  Martinsen, P.  Keim, B.  Rehill, R. L.  Lindroth, and T. G.  Whitham. 2007. Plant genetics predicts intra-annual variation in phytochemistry and arthropod community structure.. Molecular ecology 16:5057 - 69.

Shuster, S. M., E. V.  Lonsdorf, G. M.  Wimp, J. K.  Bailey, and T. G.  Whitham. 2006. Community heritability measures the evolutionary consequences of indirect genetic effects on community structure.. Evolution; international journal of organic evolution 60:991 - 1003.

Whitham, T. G., J. K.  Bailey, J. A.  Schweitzer, S. M.  Shuster, R. K.  Bangert, C. J.  LeRoy, E. V.  Lonsdorf, G. J.  Allan, S. P.  DiFazio, B. M.  Potts, D. G.  Fischer, C. A.  Gehring, R. L.  Lindroth, J. C.  Marks, S. C.  Hart, G. M.  Wimp, and S. C.  Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems.. Nature reviews. Genetics 7:510 - 23.

Bangert, R. K., G. J.  Allan, R. J.  Turek, G. M.  Wimp, N.  Meneses, G. D.  Martinsen, P.  Keim, and T. G.  Whitham. 2006. From genes to geography: a genetic similarity rule for arthropod community structure at multiple geographic scales.. Molecular ecology 15:4215 - 28.

Bailey, J. K., S. C.  Wooley, R. L.  Lindroth, and T. G.  Whitham. 2006. Importance of species interactions to community heritability: a genetic basis to trophic-level interactions.. Ecology letters 9:78 - 85.