Heinrich, P. L., P. G.  Flikkema, D.  F, B.  EP, and A.  AJ. 2023. Toward cyber-eco systems: networked sensing, inference and control for ecological and agricultural systems.. 397-417 in  Handbook of dynamic data driven applications systems,. Springer, Cham. . Springer, Cham.

Patterson, A. M., L.  Flores-Rentería, A. V.  Whipple, T. G.  Whitham, and C. A.  Gehring. 2018. Common garden experiments disentangle plant genetic and environmental contributions to ectomycorrhizal fungal community structure.. New Phytologist 221.

Flores-Rentería, L., A. V.  Whipple, G. J.  Benally, A. M.  Patterson, B.  Canyon, and C. A.  Gehring. 2018. High temperature at lower elevation sites fails to promote acclimation or adaptation to heat stress during pollen germination. . Frontiers in Plant Science 9.

Menon, M., J. C.  Bagley, C. J.  Friedline, A. V.  Whipple, A. W.  Schoettle, A.  Leal-Senz, C.  Wehenkel, F.  Molina-Freaner, L.  Flores-Renter3?a, S.  M. Gonzalez-Elizondo, R. A.  Sniezko, S. A.  Cushman, K. M.  Waring, and A. J.  Eckert. 2018. The role of hybridization during ecological divergence of southwestern white pine (Pinus strobiformis) and limber pine (P. flexilis). Molecular Ecology 27:1245-1260.

Waring, K., S.  Cushman, A.  Eckert, L.  Flores-Renteria, R.  Sniezko, S.  Still, C.  Wehenkel, A. V.  Whipple, M.  Wing, E.  Boes, E.  Bucholz, J.  Burnett, A.  Castilla, J.  DaBell, C.  Friedline, C.  Garms, E.  Heck, J.  Johnson, A.  Leal-Saenz, B.  McTeague, M.  Menon, and E.  Moler. 2017. Blending Ecology and Evolution using Emerging Technologies to Determine Species Distributions with a Non-native Pathogen in a Changing Climate.. in  Forest Regeneration in Changing Climates. Corvallis, OR.

Knapp, J., and P. G.  Flikkema. 2017. Design and Implementation of an Energy-Neutral Solar Energy System for Wireless Sensor-Actuator Nodes. 6 - 9 in  IEEE Global IoT Summit (GIoTS-2017). Geneva, Switzerland.

Waring, K., S.  Cushman, A.  Eckert, L.  Flores-Renteria, R.  Sniezko, C.  Still, C.  Wehenkel, A. V.  Whipple, M.  Wing, and P.  Yury. 2017. A holistic approach to genetic conservation in Pinus strobiformis.. 17 - 21 in  International Scientific Conference on Genetics of Populations Progress and Perspectives commemorating the 80th birthday of Academician Altukhov and dedicated to the 45th Anniversary of the Laboratory of Population Genetics named after Yu P Biological Sta. Zvenogorod Biological Station, Russia.

Knapp, J. D., M.  Middleton, P. L.  Heinrich, A. V.  Whipple, and P. G.  Flikkema. 2017. Support of distributed ecological experiments via closed-loop environmental control. in  2017 IEEE Conference on Technologies for Sustainability (SusTech), . IEEE SusTechPhoenix, AZ.

Gehring, C. A., C. M.  Sthultz, L.  Flores-Rentería, A. V.  Whipple, and T. G.  Whitham. 2017. Tree genetics defines fungal partner communities that may confer drought tolerance. . PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES 114.

Compson, Z. G., T. G.  Hungate, N.  Whitham, P. E.  Meneses, T.  Busby, A. C.  Wojtowicz, K. J.  Ford, and J. C.  Marks. 2016. B.A. Adams, and Plant genotype influences aquatic-terrestrial ecosystem linkages through timing and composition of insect emergence.. ECOSPHERE   e01331 101002ecs21331 DOI 101002ecs21331 7.

Evans, L. M., S.  Kaluthota, D. W.  Pearce, G. J.  Allan, K.  Floate, S. B.  Rood, and T. G.  Whitham. 2016. Bud phenology and growth are subject to divergent selection across a latitudinal gradient in Populus angustifolia and impact adaptation across the distributional range and associated arthropods.. Ecology and evolution 6:4565 - 81.

Gehring, C. A., M.  Hayer, L.  Flores-Renteria, A. L.  Krohn, E.  Schwartz, and P.  Dijkstra. 2016. Cheatgrass invasion alters the abundance and composition of dark septate fungal communities in sagebrush steppe.. Botany 9:481 - 491.

Waring, K., S.  Cushman, A.  Eckert, L.  Flores-Renteria, H.  Lintz, R.  Sniezko, C.  Still, C.  Wehenkel, A. V.  Whipple, and M.  Wing. 2016. Collaborative research for sustainable management of southwestern white pine.. 2 - 5 in  Society of American Foresters National Convention. Madison, Wisconsin, USA.

Fischer, D. G., E.  Wimp, R. K.  Hersch-Green, C. J.  Bangert, J. K.  LeRoy, J. A.  Bailey, C.  Schweitzer, S. C.  Dirks, G. J.  Hart, and T. G.  Whitham. 2016. G.M. Allan, and Tree genetics strongly effect forest productivity, but intraspecific diversity-productivity relationships do not.. FUNCTIONAL ECOLOGY  DOI 1011111365243512733 31:520 - 529.

Flathers, K. N., T. E.  Kolb, J. B.  Bradford, K. M.  Waring, and W. K.  Moser. 2016. Long-term thinning alters ponderosa pine reproduction in northern Arizona.. Forest Ecology and Management 374:154 - 165.

Floate, K. D., J.  Godbout, M. K.  Lau, N.  Isabel, and T. G.  Whitham. 2016. Plant-herbivore interactions in a trispecific hybrid swarm of Populus: assessing support for hypotheses of hybrid bridges, evolutionary novelty and genetic similarity.. The New phytologist 209:832 - 44.

Castilla, A. R., R.  Sniezko, K.  Waring, S.  Cushman, A. J.  Eckert, L.  Flores, C.  Still, C.  Wehenkel, A.  Whipple, M.  Wing, T. E.  Kolb, and B. A.  Goodrich. 2016. Sustaining southwestern white pine by combining experimental work and genomic tools.

Lamit, L. J., L. M.  Holeski, L.  Flores-Renteria, T. G.  Whitham, and C. A.  Gehring. 2016. Tree genotype influences ectomycorrhizal fungal community structure: Ecological and evolutionary implications. FUNGAL ECOLOGY 24:124 - 134.

Lamit, L. J., L. M.  Holeski, L.  Flores-Rentería, T. G.  Whitham, and C. A.  Gehring. 2016. Tree genotype influences ectomycorrhizal fungal community structure: ecological and evolutionary implications. . Fungal Ecology 24.

Barak, R. S., J. B.  Fant, A. T.  Kramer, and K. A.  Skogen. 2015. Assessing the value of potential ?native winners? for restoration of cheatgrass-invaded habitat.. Western North American Naturalist 75:58 - 69.

Dijkstra, P., E.  Salpas, D.  Fairbanks, E. B.  Miller, S. B.  Hagerty, K. J.  van Groenigen, B. A.  Hungate, J. C.  Marks, G. W.  Koch, and E.  Schwartz. 2015. High carbon use efficiency in soil microbial communities is related to growth, not storage compound synthesis.. Soil Biology and Biochemistry 89:35 - 43.

Ghosh, S., D. M.  Bell, J. S.  Clark, A. E.  Gelfand, and P.  Flikkema. 2014. Process Modeling for Soil Moisture Using Sensor Network Data .. Statistical Methodology (Special issue on modern statistical methods in ecology) 12:99 - 112.

Knapp, J., M.  Elo, J.  Schaffer, and P. G.  Flikkema. 2014. Towards Intelligent Closed-Loop Workflows for Ecological Research Dynamic Data-driven Environmental Systems. in  Dynamic Data-driven Environmental Systems Science Conference (DyDESS). DyDESSCambridge, MA, USA.

Grady, K. C., D. C.  Laughlin, S. M.  Ferrier, T. E.  Kolb, S. C.  Hart, G. J.  Allan, and T. G.  Whitham. 2013. Conservative leaf economic traits correlate with fast growth of genotypes of a foundation riparian species near the thermal maximum extent of its geographic range .. Functional Ecology 27:427 - 438.

Flikkema, P. G. 2013. Cyber-Eco Technology: Engineering of Ecological Systems [Point of View]. IEEE.

Gehring, C. A., D.  Flores-Rentería, C. M.  Sthultz, T. M.  Leonard, L.  Flores-Renteria, A. V.  Whipple, and T. G.  Whitham. 2013. Plant genetics and interspecific competitive interactions determine ectomycorrhizal fungal community responses to climate change .. Molecular Ecology 23:1379 - 1391.

Bangert, R. K., S. M.  Ferrier, L.  Evans, K.  Kennedy, and K. C.  Grady. 2013. The Proportion of Three Foundation Plant Species and Their Genotypes Influence an Arthropod Community: Restoration Implications for the Endangered Southwes... Restoration Ecology 21:447 - 456.

Bailey, J. K., J. A.  Schweitzer, B. M.  Fitzpatrick, M. A.  Genung, C. C.  Pregitzer, M.  Zinkgraf, T. G.  Whitham, A.  Keith, J. M.  Reilly-Wapstra, B. M.  Potts, B. J.  Rehill, C. J.  LeRoy, D. G.  Fischer, G. R.  Iason, M.  Dicke, and S. E.  Hartley. 2012. From genes to ecosystems: emerging concepts bridging ecological and evolutionary dynamics.. 269 - 286  (G. R.  Iason, Dicke, M., and Hartley, S. E., Eds.). Cambridge University PressNew York.

Lojewski, N. R., D. G.  Fischer, J. K.  Bailey, J. A.  Schweitzer, T. G.  Whitham, and S. C.  Hart. 2012. Genetic components to belowground carbon fluxes in a riparian forest ecosystem: a common garden approach.. The New phytologist 195:631 - 9.

Flikkema, P. G., K. R.  Yamamoto, S.  Boegli, C.  Porter, and P. L.  Heinrich. 2012. Towards Cyber-Eco Systems: Networked Sensing, Inference and Control for Distributed Ecological Experiments. in  IEEE International Conference on Cyber, Physical and Social Computing.

Ferrier, S. M., R. K.  Bangert, E. I.  Hersch-Green, J. K.  Bailey, and G. J.  Allan. 2012. Unique arthropod communities on different host-plant genotypes results in greater arthropod diversity. Arthropod-Plant Interactions 6:187 - 195.

Grady, K. C., S. M.  Ferrier, T. E.  Kolb, S. C.  Hart, G. A.  Allan, and T. G.  Whitham. 2011. Genetic variation in productivity of foundation riparian species at the edge of their distribution: implications for restoration and assisted migration in a warming climate .. Global Change Biology 17:3724 - 3735.

Clark, J. S., P.  Agarwal, D. M.  Bell, P. G.  Flikkema, A.  Gelfand, X.  Nguyen, E.  Ward, and J.  Yang. 2011. Inferential ecosystem models, from network data to prediction.. Ecological applications : a publication of the Ecological Society of America 21:1523 - 36.

Li, C., P. G.  Flikkema, and S. L.  Howard. 2011. Progressive coding and iterative source-channel decoding in wireless data gathering networks .. Dec 5 - 9 in  Proceedings of 2011 IEEE Global Telecommunications Conference. IEE GLOBECOMHouston, TX, USA.

Flikkema, P. G. 2010. Energy-efficient model inference in wireless sensing: asymmetric data processing .. IEEEKona, HI.

Yamamoto, K., Y.  He, P. L.  Heinrich, A.  Orange, B.  Ruggeri, H.  Wilberger, and P. G.  Flikkema. 2010. WiSARDNet field-to-desktop: building a wireless cyberinfrastructure for environmental monitoring.. 101 - 108 in vanRiper C III, Wakeling, B. F., and Sisk, T. D. The Colorado Plateau IV: Shaping Conservation Through Science and Management. The University of Arizona PressTucson, AZ, USA.

Bailey, J. K., J. A.  Schweitzer, F.  Ubeda, J.  Koricheva, C. J.  LeRoy, M. D.  Madritch, B. J.  Rehill, R. K.  Bangert, D. G.  Fischer, G. J.  Allan, and T. G.  Whitham. 2009. From genes to ecosystems: a synthesis of the effects of plant genetic factors across levels of organization.. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 364:1607 - 16.

Lojewski, N. R., D. G.  Fischer, J. K.  Bailey, J. A.  Schweitzer, T. G.  Whitham, and S. C.  Hart. 2009. Genetic basis of aboveground productivity in two native Populus species and their hybrids.. Tree physiology 29:1133 - 42.

Yamamoto, K. R., and P. G.  Flikkema. 2009. Prospector: Multiscale Energy Measurement of Networked Embedded Systems with Wideband Power Signals. IEEEVancouver, Canada.

He, Y., and P. G.  Flikkema. 2009. System-level characterization of single-chip radios for wireless sensor network applications .. in  Proceedings of the IEEE 10th Annual Wireless and Microwave Technology Conference. IEEEClearwater, Florida, USA.

Schweitzer, J. A., M. D.  Madritch, J. K.  Bailey, C. J.  LeRoy, D. G.  Fischer, B. J.  Rehill, R. L.  Lindroth, A. E.  Hagerman, S. C.  Wooley, S. C.  Hart, and T. G.  Whitham. 2008. From genes to ecosystems: the genetic basis of condensed tannins and their role in nutrient regulation in a Populus model system .. Ecosystems 11:1005 - 1020.

Bangert, R. K., E. V.  Lonsdorf, G. M.  Wimp, S. M.  Shuster, D.  Fischer, J. A.  Schweitzer, G. J.  Allan, J. K.  Bailey, and T. G.  Whitham. 2008. Genetic structure of a foundation species: scaling community phenotypes from the individual to the region.. Heredity 100:121 - 31.

Schweitzer, J. A., J. K.  Bailey, D. G.  Fischer, C. J.  LeRoy, E. V.  Lonsdorf, T. G.  Whitham, and S. C.  Hart. 2008. Plant-soil microorganism interactions: heritable relationship between plant genotype and associated soil microorganisms.. Ecology 89:773 - 81.

Flikkema, P. G., P. K.  Agarwal, J. S.  Clark, C.  Ellis, and A.  Gelfand. 2007. From Data Reverence to Data Relevance: Model-Mediated Wireless Sensing of the Physical Environment. 988 - 994 in G.  Albada, Dongarra, J., and Sloot, P. ICCS 2007, 7th International Conference. Springer Berlin/HeidelbergBeijing, China.

Fischer, F. G., S. C.  Hart, B. J.  Rehill, R. L.  Lindroth, P.  Keim, and T. Gand Whitham. 2006. Do high-tannin leaves require more roots?. Oecologia 149:668 - 75.

Whitham, T. G., J. K.  Bailey, J. A.  Schweitzer, S. M.  Shuster, R. K.  Bangert, C. J.  LeRoy, E. V.  Lonsdorf, G. J.  Allan, S. P.  DiFazio, B. M.  Potts, D. G.  Fischer, C. A.  Gehring, R. L.  Lindroth, J. C.  Marks, S. C.  Hart, G. M.  Wimp, and S. C.  Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems.. Nature reviews. Genetics 7:510 - 23.

Flikkema, P. G., P. K.  Agarwal, J. S.  Clark, C.  Ellis, and A.  Gelfand. 2006. Model-Driven Dynamic Control of Embedded Wireless Sensor Networks. 409 - 416 in V.  Alexandrov, van Albada, G., Sloot, P., and Dongarra, J. Computational Science - ICCS 2006, Lecture Notes in Computer Science, 6th International Conference. Springer Berlin/HeidelbergReading, UK.

Flikkema, P. G. 2006. The precision and energetic cost of snapshot estimates in wireless sensor networks .. 603 - 608 in  Proceedings of 11th Annual IEEE Symposium on Computing and Communications 2006. IEEE ISCC ?06Cagliari Italy.

Yang, Z., B.  Ruggeri, P. G.  Flikkema, D.  Johnson, M.  Wright, and K.  Xia. 2005. WiSARDNET: a system solution for high performance in situ environmental monitoring.. in  Proceedings of the 2nd International Workshop on Networked Sensing Systems. IEEESan Diego, CA, USA.

Flikkema, P. G., and B.  West. 2003. Clique-based randomized multiple access for energy-efficient ad hoc wireless networks.. 977 - 981 in  Proceedings of the Communication and Networking Conference IEEE WCNC 2003. IEEE WCNCNew Orleans, LA, USA.