TY - JOUR T1 - Phylogenetic organization of bacterial activity. JF - The ISME journal Y1 - 2016 A1 - Ember M Morrissey A1 - Mau,Rebecca L A1 - Egbert Schwartz A1 - Caporaso,J Gregory A1 - P Dijkstra A1 - van Gestel,Natasja A1 - BJ Koch A1 - Liu,Cindy M A1 - Hayer,Michaela A1 - McHugh,Theresa A A1 - Jane C Marks A1 - Lance B Price A1 - Hungate,Bruce A KW - Bacteria KW - Biological Evolution KW - Carbon Isotopes KW - Ecology KW - Ecosystem KW - Oxygen Isotopes KW - Phenotype KW - Phylogeny AB -

Phylogeny is an ecologically meaningful way to classify plants and animals, as closely related taxa frequently have similar ecological characteristics, functional traits and effects on ecosystem processes. For bacteria, however, phylogeny has been argued to be an unreliable indicator of an organism's ecology owing to evolutionary processes more common to microbes such as gene loss and lateral gene transfer, as well as convergent evolution. Here we use advanced stable isotope probing with (13)C and (18)O to show that evolutionary history has ecological significance for in situ bacterial activity. Phylogenetic organization in the activity of bacteria sets the stage for characterizing the functional attributes of bacterial taxonomic groups. Connecting identity with function in this way will allow scientists to begin building a mechanistic understanding of how bacterial community composition regulates critical ecosystem functions.

VL - 10 SN - 1751-7362 UR - http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&DbFrom=pubmed&Cmd=Link&LinkName=pubmed_pubmed&LinkReadableName=Related%20Articles&IdsFromResult=26943624&ordinalpos=3&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSumhttp://www.ncbi. IS - 9 ER - TY - CONF T1 - Taxon-Specific Responses To Whole System Carbon Cycling In The Root Microbiome. T2 - Phytobiomes from microbes to plant ecosystems Y1 - 2016 A1 - P Dijkstra A1 - RL Mau A1 - McHugh,TA A1 - BJ Koch A1 - Marks,JC A1 - van Groenigen,K-J A1 - Liu,X-J A1 - Schwartz,E A1 - Morrissey,EM A1 - Hungate,BA AB -

Dijkstra, P., Mau, R.L., McHugh, T.A., Koch, B.J., Marks, J.C., vanGroenigen, K-J., Liu, X-J. A., Schwartz, E., Morrissey, E.M. and Hungate, B.A. (2016). From Taxon-Specific Responses To Whole System Carbon Cycling In The Root Microbiome. Phytobiomes: from microbes to plant ecosystems. Nov 2016, .

JF - Phytobiomes from microbes to plant ecosystems T3 - Phytobiomes from microbes to plant ecosystems CY - Santa Fe, New Mexicao, USA N1 - [Original String]:Dijkstra, P., Mau, R.L., McHugh, T.A., Koch, B.J., Marks, J.C., van Groenigen, K-J., Liu, X-J. A., Schwartz, E., Morrissey, E.M. and Hungate, B.A. (2016). From Taxon-Specific Responses To Whole System Carbon Cycling In The Root Microbiome. Phytobiomes: from microbes to plant ecosystems. Nov 2016, Santa Fe NM. ER - TY - JOUR T1 - High carbon use efficiency in soil microbial communities is related to growth, not storage compound synthesis. JF - Soil Biology and Biochemistry Y1 - 2015 A1 - P Dijkstra A1 - Salpas,E A1 - Fairbanks,D A1 - Miller,EB A1 - Hagerty,SB A1 - KJ van Groenigen A1 - Hungate,BA A1 - Marks,JC A1 - GW Koch A1 - Schwartz,E VL - 89 N1 - [Original String]:Dijkstra, P., Salpas, E., Fairbanks, D., Miller EB, Hagerty, S.B., van Groenigen, K.J., Hungate, B.A., Marks, J.C., Koch, G.W., and Schwartz, E. (2015). High carbon use efficiency in soil microbial communities is related to growth, not storage compound synthesis. Soil Biology and Biochemistry 89, 35-43. ER - TY - CONF T1 - High carbon use efficiency is not explained by production of storage compounds. T2 - European Geophysical Union Annual Meeting Y1 - 2015 A1 - P Dijkstra A1 - KJ van Groenigen AB -

Dijkstra, P. and van Groenigen, K.J. (2015). High carbon use efficiencyis not explained by production of storage compounds. EGU April 12-17, Vienna.

JF - European Geophysical Union Annual Meeting T3 - European Geophysical Union Annual Meeting CY - Vienna, Austria N1 - [Original String]:Dijkstra, P. and van Groenigen, K.J. (2015). High carbon use efficiency is not explained by production of storage compounds. EGU April 12-17, Vienna. ER - TY - Generic T1 - Influence of varying nitrogen availability on soil microbial growth efficiency. T2 - Ecological Society of America Annual Meeting Y1 - 2015 A1 - Hagerty,SB A1 - KJ van Groenigen A1 - Schwartz,E A1 - Hungate,BA A1 - GW Koch A1 - P Dijkstra JF - Ecological Society of America Annual Meeting T3 - Ecological Society of America Annual Meeting PB - ESA CY - Baltimore, MD, USA N1 - [Original String]:Hagerty, S.B., van Groenigen, K.J., Schwartz, E., Hungate, B.A., Koch, G.W. and Dijkstra, P. (2015). Influence of varying nitrogen availability on soil microbial growth efficiency. ESA Aug 9-14, Baltimore. ER - TY - CONF T1 - October). VARIATION IN STOMATAL TRAITS ASSOCIATED WITH DROUGHT TOLERANT AND INTOLERANT PINYON PINE (PINUS EDULIS). T2 - Research Experiences for Undergraduates Symposium (REUS). National Science Foundation. Y1 - 2015 A1 - Vecenti,F A1 - AV Whipple A1 - CA Gehring AB -

Vecenti, F., Whipple, A. V., & Gehring, C. A. (2015, October).VARIATION IN STOMATAL TRAITS ASSOCIATED WITH DROUGHT TOLERANT AND INTOLERANT PINYON PINE (PINUS EDULIS). 2015 Research Experiences for Undergraduates Symposium (REUS). National Science Foundation, Arlington, VA: Council on Undergraduate Research.

JF - Research Experiences for Undergraduates Symposium (REUS). National Science Foundation. T3 - Research Experiences for Undergraduates Symposium (REUS). National Science Foundation, Council on Undergraduate Research. PB - National Science Foundation CY - Arlington, Virginia, USA N1 - [Original String]:Vecenti, F., Whipple, A. V., & Gehring, C. A. (2015, October). VARIATION IN STOMATAL TRAITS ASSOCIATED WITH DROUGHT TOLERANT AND INTOLERANT PINYON PINE (PINUS EDULIS). 2015 Research Experiences for Undergraduates Symposium (REUS). National Science Foundation, Arlington, VA: Council on Undergraduate Research. ER - TY - CONF T1 - Model-Driven Dynamic Control of Embedded Wireless Sensor Networks T2 - Computational Science - ICCS 2006, Lecture Notes in Computer Science, 6th International Conference Y1 - 2006 A1 - PG Flikkema A1 - Agarwal,PK A1 - Clark,JS A1 - Ellis,C A1 - Gelfand,A ED - Alexandrov,V ED - van Albada,G ED - Sloot,P ED - Dongarra,J AB -

Next-generation wireless sensor networks may revolutionize understanding of environmental change by assimilating heterogeneous data, assessing the relative value and costs of data collection, and sche

JF - Computational Science - ICCS 2006, Lecture Notes in Computer Science, 6th International Conference T3 - Computational Science - ICCS 2006, Lecture Notes in Computer Science, 6th International Conference, PB - Springer Berlin/Heidelberg CY - Reading, UK VL - 3993 UR - http://www.springerlink.com/content/5603gh1252528020 ER - TY - JOUR T1 - Terrestrial transects for global change research JF - Vegetation Y1 - 1995 A1 - GW Koch A1 - Vitousek,PM A1 - Steffen,WL A1 - Walker,BH AB - The International Geosphere-Biosphere Program has proposed a set of large-scale terrestrial transects to study the effects of changes in climate, land use, and atmospheric composition (“global change”) on biogeochemistry, surface-atmosphere exchange, and vegetation dynamics of terrestrial ecosystems. The transects (≈ 1000 km) will be located along existing environmental and land use intensity gradients that span transitions between biomes in regions likely to be widely affected by forcing from components of global change or where the impacts of global change are likely to feed back to affect atmospheric, climatic, or hydrologic systems. Experimental studies on the transects will examine short-term changes in ecosystem function and biosphere-atmosphere interaction in response to variation in primary controlling variables. A hierarchy of modeling approaches will develop predictions of long-term changes in biome boundaries and vegetation distribution. The proposed initial set of IGBP terrestrial transects are located in four key regions: (1) humid tropical forests undergoing land use change, (2) high latitudes including the transition from boreal forest to tundra, (3) semi-arid tropical regions including transitions from dry forest to shrublands and savannas, and (4) mid latitude semi-arid regions encompassing transitions from shrubland or grassland to forests. We discuss here the rationale and general research design of transect studies proposed for each of these priority regions. VL - 121 UR - http://link.springer.com/article/10.1007/BF00044672 ER -